Cluster: Rep_1562_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1562
- CGC Family ID: CGCFAM_00011
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1562_c_24 | Rep_1562_c_24_14 | 16015 | 18210 | - | GT2 | GT4 |
| CAZyme | Rep_1562_c_24 | Rep_1562_c_24_15 | 18222 | 20306 | - | GT2 | GT4 |
| TC | Rep_1562_c_24 | Rep_1562_c_24_16 | 20309 | 21079 | - | 3.A.1.103.4 |
| TC | Rep_1562_c_24 | Rep_1562_c_24_17 | 21081 | 21848 | - | 3.A.1.103.4 |
Gene ID: Rep_1562_c_24_14
Type: CAZyme
Location: 16015 - 18210 (-)
Type: CAZyme
Location: 16015 - 18210 (-)
Gene ID: Rep_1562_c_24_15
Type: CAZyme
Location: 18222 - 20306 (-)
Type: CAZyme
Location: 18222 - 20306 (-)
Gene ID: Rep_1562_c_24_16
Type: TC
Location: 20309 - 21079 (-)
Type: TC
Location: 20309 - 21079 (-)
Gene ID: Rep_1562_c_24_17
Type: TC
Location: 21081 - 21848 (-)
Type: TC
Location: 21081 - 21848 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Scybalousia
Species
Scybalousia sp900543675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.