Cluster: Rep_1562_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1562
- CGC Family ID: CGCFAM_00169
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1562_c_5 | Rep_1562_c_5_9 | 7491 | 8780 | + | 2.A.66.2.14 |
| NULL(UNKNOWN) | Rep_1562_c_5 | Rep_1562_c_5_10 | 8805 | 9593 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1562_c_5 | Rep_1562_c_5_11 | 9709 | 10113 | - | GtrA_DPMS_TM |
| CAZyme | Rep_1562_c_5 | Rep_1562_c_5_12 | 10094 | 11041 | - | GT2 |
Gene ID: Rep_1562_c_5_9
Type: TC
Location: 7491 - 8780 (+)
Type: TC
Location: 7491 - 8780 (+)
Gene ID: Rep_1562_c_5_10
Type:
Location: 8805 - 9593 (-)
Type:
Location: 8805 - 9593 (-)
Gene ID: Rep_1562_c_5_11
Type: pfam
Location: 9709 - 10113 (-)
Type: pfam
Location: 9709 - 10113 (-)
Gene ID: Rep_1562_c_5_12
Type: CAZyme
Location: 10094 - 11041 (-)
Type: CAZyme
Location: 10094 - 11041 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Scybalousia
Species
Scybalousia sp900543675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.