Cluster: Rep_1562_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1562
- CGC Family ID: CGCFAM_02180
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1562_c_0 | Rep_1562_c_0_55 | 58984 | 61887 | + | GT51 |
| pfam | Rep_1562_c_0 | Rep_1562_c_0_56 | 61991 | 62452 | - | Y1_Tnp |
| TC | Rep_1562_c_0 | Rep_1562_c_0_57 | 62621 | 63376 | - | 2.A.5.5.5 |
Gene ID: Rep_1562_c_0_55
Type: CAZyme
Location: 58984 - 61887 (+)
Type: CAZyme
Location: 58984 - 61887 (+)
Gene ID: Rep_1562_c_0_56
Type: pfam
Location: 61991 - 62452 (-)
Type: pfam
Location: 61991 - 62452 (-)
Gene ID: Rep_1562_c_0_57
Type: TC
Location: 62621 - 63376 (-)
Type: TC
Location: 62621 - 63376 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Scybalousia
Species
Scybalousia sp900543675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.