Cluster: Rep_1545_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1545
- CGC Family ID: CGCFAM_04048
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1545_c_8 | Rep_1545_c_8_4 | 1648 | 2241 | + | 4.F.1.1.7 |
| pfam | Rep_1545_c_8 | Rep_1545_c_8_5 | 2468 | 2896 | - | GtrA_DPMS_TM |
| pfam | Rep_1545_c_8 | Rep_1545_c_8_6 | 2862 | 5378 | - | YfhO |
| CAZyme | Rep_1545_c_8 | Rep_1545_c_8_7 | 5382 | 6317 | - | GT2 |
Gene ID: Rep_1545_c_8_4
Type: TC
Location: 1648 - 2241 (+)
Type: TC
Location: 1648 - 2241 (+)
Gene ID: Rep_1545_c_8_5
Type: pfam
Location: 2468 - 2896 (-)
Type: pfam
Location: 2468 - 2896 (-)
Gene ID: Rep_1545_c_8_6
Type: pfam
Location: 2862 - 5378 (-)
Type: pfam
Location: 2862 - 5378 (-)
Gene ID: Rep_1545_c_8_7
Type: CAZyme
Location: 5382 - 6317 (-)
Type: CAZyme
Location: 5382 - 6317 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
RUG705
Species
RUG705 sp900759875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.