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Cluster: Rep_1545_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1545_c_1 Rep_1545_c_1_125 124417 126291 + 9.B.18.2.1
pfam Rep_1545_c_1 Rep_1545_c_1_126 126281 127408 + DegT_DnrJ_EryC1
TC Rep_1545_c_1 Rep_1545_c_1_127 127423 128028 + 9.B.18.1.3
pfam Rep_1545_c_1 Rep_1545_c_1_128 128028 128564 + Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4
pfam Rep_1545_c_1 Rep_1545_c_1_129 128545 129507 + ATP-grasp_3 | Dala_Dala_lig_C | RimK | ATPgrasp_Ter | PylC-like_N
CAZyme Rep_1545_c_1 Rep_1545_c_1_130 129517 130650 + GT4
CAZyme Rep_1545_c_1 Rep_1545_c_1_131 130656 131696 + GT4
NULL(UNKNOWN) Rep_1545_c_1 Rep_1545_c_1_132 131715 133070 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1545_c_1 Rep_1545_c_1_133 133072 133869 + GT32
Gene ID: Rep_1545_c_1_125
Type: TC
Location: 124417 - 126291 (+)
Gene ID: Rep_1545_c_1_126
Type: pfam
Location: 126281 - 127408 (+)
Gene ID: Rep_1545_c_1_127
Type: TC
Location: 127423 - 128028 (+)
Gene ID: Rep_1545_c_1_128
Type: pfam
Location: 128028 - 128564 (+)
Gene ID: Rep_1545_c_1_129
Type: pfam
Location: 128545 - 129507 (+)
Gene ID: Rep_1545_c_1_130
Type: CAZyme
Location: 129517 - 130650 (+)
Gene ID: Rep_1545_c_1_131
Type: CAZyme
Location: 130656 - 131696 (+)
Gene ID: Rep_1545_c_1_132
Type:
Location: 131715 - 133070 (+)
Gene ID: Rep_1545_c_1_133
Type: CAZyme
Location: 133072 - 133869 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
RUG705
→
Species
RUG705 sp900759875

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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