Cluster: Rep_1545_CGC2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_1545
- CGC Family ID: CGCFAM_01433
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1545_c_1 | Rep_1545_c_1_65 | 66238 | 67698 | + | 2.A.66.2.22 |
| pfam | Rep_1545_c_1 | Rep_1545_c_1_66 | 67703 | 68758 | + | Sulfotransfer_1 |
| pfam | Rep_1545_c_1 | Rep_1545_c_1_67 | 68768 | 69634 | + | LicD |
| CAZyme | Rep_1545_c_1 | Rep_1545_c_1_68 | 69634 | 70581 | + | GT2 |
| CAZyme | Rep_1545_c_1 | Rep_1545_c_1_69 | 70587 | 71558 | + | GT2 |
| CAZyme | Rep_1545_c_1 | Rep_1545_c_1_70 | 71555 | 74056 | + | GT4 |
| pfam | Rep_1545_c_1 | Rep_1545_c_1_71 | 74067 | 75353 | + | Polysacc_deac_1 |
| CAZyme | Rep_1545_c_1 | Rep_1545_c_1_72 | 75472 | 76194 | + | GT26 |
Gene ID: Rep_1545_c_1_65
Type: TC
Location: 66238 - 67698 (+)
Type: TC
Location: 66238 - 67698 (+)
Gene ID: Rep_1545_c_1_66
Type: pfam
Location: 67703 - 68758 (+)
Type: pfam
Location: 67703 - 68758 (+)
Gene ID: Rep_1545_c_1_67
Type: pfam
Location: 68768 - 69634 (+)
Type: pfam
Location: 68768 - 69634 (+)
Gene ID: Rep_1545_c_1_68
Type: CAZyme
Location: 69634 - 70581 (+)
Type: CAZyme
Location: 69634 - 70581 (+)
Gene ID: Rep_1545_c_1_69
Type: CAZyme
Location: 70587 - 71558 (+)
Type: CAZyme
Location: 70587 - 71558 (+)
Gene ID: Rep_1545_c_1_70
Type: CAZyme
Location: 71555 - 74056 (+)
Type: CAZyme
Location: 71555 - 74056 (+)
Gene ID: Rep_1545_c_1_71
Type: pfam
Location: 74067 - 75353 (+)
Type: pfam
Location: 74067 - 75353 (+)
Gene ID: Rep_1545_c_1_72
Type: CAZyme
Location: 75472 - 76194 (+)
Type: CAZyme
Location: 75472 - 76194 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
RUG705
Species
RUG705 sp900759875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.