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Cluster: Rep_1545_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1545_c_1 Rep_1545_c_1_21 19589 20293 + 9.B.20.1.1
TC Rep_1545_c_1 Rep_1545_c_1_22 20340 21626 - 3.A.15.4.1
TF Rep_1545_c_1 Rep_1545_c_1_23 21809 22504 + Trans_reg_C
STP Rep_1545_c_1 Rep_1545_c_1_24 22517 23743 + HATPase_c | HisKA
TC Rep_1545_c_1 Rep_1545_c_1_25 23828 24508 + 3.A.1.125.3
pfam Rep_1545_c_1 Rep_1545_c_1_26 24508 27087 + FtsX | FtsX
CAZyme Rep_1545_c_1 Rep_1545_c_1_27 27178 28398 + GT2
pfam Rep_1545_c_1 Rep_1545_c_1_28 28494 31451 + SMC_N | SMC_hinge | AAA_21 | AAA_23
NULL(UNKNOWN) Rep_1545_c_1 Rep_1545_c_1_29 31608 32126 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1545_c_1 Rep_1545_c_1_30 32159 34069 + CE4
Gene ID: Rep_1545_c_1_21
Type: TC
Location: 19589 - 20293 (+)
Gene ID: Rep_1545_c_1_22
Type: TC
Location: 20340 - 21626 (-)
Gene ID: Rep_1545_c_1_23
Type: TF
Location: 21809 - 22504 (+)
Gene ID: Rep_1545_c_1_24
Type: STP
Location: 22517 - 23743 (+)
Gene ID: Rep_1545_c_1_25
Type: TC
Location: 23828 - 24508 (+)
Gene ID: Rep_1545_c_1_26
Type: pfam
Location: 24508 - 27087 (+)
Gene ID: Rep_1545_c_1_27
Type: CAZyme
Location: 27178 - 28398 (+)
Gene ID: Rep_1545_c_1_28
Type: pfam
Location: 28494 - 31451 (+)
Gene ID: Rep_1545_c_1_29
Type:
Location: 31608 - 32126 (+)
Gene ID: Rep_1545_c_1_30
Type: CAZyme
Location: 32159 - 34069 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
RUG705
→
Species
RUG705 sp900759875

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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