Cluster: Rep_1530_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_1530
- CGC Family ID: CGCFAM_02187
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1530_c_30 | Rep_1530_c_30_5 | 4498 | 5436 | + | GT2 |
| TC | Rep_1530_c_30 | Rep_1530_c_30_6 | 5564 | 7090 | + | 2.A.66.1.40 |
| CAZyme | Rep_1530_c_30 | Rep_1530_c_30_7 | 7116 | 7847 | + | GT2 |
| NULL(UNKNOWN) | Rep_1530_c_30 | Rep_1530_c_30_8 | 7848 | 9359 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_1530_c_30 | Rep_1530_c_30_9 | 9383 | 11059 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1530_c_30 | Rep_1530_c_30_10 | 11192 | 13723 | + | CBM13 | CBM13 | CBM13 | CBM13 | GH25 |
| CAZyme | Rep_1530_c_30 | Rep_1530_c_30_11 | 13741 | 14724 | + | GT2 |
Gene ID: Rep_1530_c_30_5
Type: CAZyme
Location: 4498 - 5436 (+)
Type: CAZyme
Location: 4498 - 5436 (+)
Gene ID: Rep_1530_c_30_6
Type: TC
Location: 5564 - 7090 (+)
Type: TC
Location: 5564 - 7090 (+)
Gene ID: Rep_1530_c_30_7
Type: CAZyme
Location: 7116 - 7847 (+)
Type: CAZyme
Location: 7116 - 7847 (+)
Gene ID: Rep_1530_c_30_8
Type:
Location: 7848 - 9359 (+)
Type:
Location: 7848 - 9359 (+)
Gene ID: Rep_1530_c_30_9
Type:
Location: 9383 - 11059 (-)
Type:
Location: 9383 - 11059 (-)
Gene ID: Rep_1530_c_30_10
Type: CAZyme
Location: 11192 - 13723 (+)
Type: CAZyme
Location: 11192 - 13723 (+)
Gene ID: Rep_1530_c_30_11
Type: CAZyme
Location: 13741 - 14724 (+)
Type: CAZyme
Location: 13741 - 14724 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Coprosoma
Species
Coprosoma sp000432855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.