Cluster: Rep_1530_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1530
- CGC Family ID: CGCFAM_02659
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1530_c_2 | Rep_1530_c_2_35 | 33580 | 34350 | - | CE4 |
| CAZyme | Rep_1530_c_2 | Rep_1530_c_2_36 | 34437 | 35708 | + | GT2 |
| pfam | Rep_1530_c_2 | Rep_1530_c_2_37 | 35878 | 37077 | + | AAA_14 | DUF4143 |
| TC | Rep_1530_c_2 | Rep_1530_c_2_38 | 37245 | 38759 | + | 3.A.1.121.3 |
Gene ID: Rep_1530_c_2_35
Type: CAZyme
Location: 33580 - 34350 (-)
Type: CAZyme
Location: 33580 - 34350 (-)
Gene ID: Rep_1530_c_2_36
Type: CAZyme
Location: 34437 - 35708 (+)
Type: CAZyme
Location: 34437 - 35708 (+)
Gene ID: Rep_1530_c_2_37
Type: pfam
Location: 35878 - 37077 (+)
Type: pfam
Location: 35878 - 37077 (+)
Gene ID: Rep_1530_c_2_38
Type: TC
Location: 37245 - 38759 (+)
Type: TC
Location: 37245 - 38759 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Coprosoma
Species
Coprosoma sp000432855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.