Cluster: Rep_151_CGC9
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_151
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_151_c_4 | Rep_151_c_4_64 | 85160 | 86008 | + | CE1 |
| pfam | Rep_151_c_4 | Rep_151_c_4_65 | 86191 | 86667 | + | Pur_ac_phosph_N |
| NULL(UNKNOWN) | Rep_151_c_4 | Rep_151_c_4_66 | 86873 | 88039 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_151_c_4 | Rep_151_c_4_67 | 88955 | 91630 | + | 1.B.18.1.2 |
| NULL(UNKNOWN) | Rep_151_c_4 | Rep_151_c_4_68 | 91658 | 92707 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_151_c_4 | Rep_151_c_4_69 | 92716 | 94260 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_151_c_4 | Rep_151_c_4_70 | 94263 | 95324 | + | 9.B.183.1.5 |
| pfam | Rep_151_c_4 | Rep_151_c_4_71 | 95371 | 95955 | + | Hexapep |
| CAZyme | Rep_151_c_4 | Rep_151_c_4_72 | 95957 | 96766 | + | GT23 |
| pfam | Rep_151_c_4 | Rep_151_c_4_73 | 96788 | 97933 | + | Glyco_tran_WbsX |
| CAZyme | Rep_151_c_4 | Rep_151_c_4_74 | 98152 | 98964 | + | GT2 |
| CAZyme | Rep_151_c_4 | Rep_151_c_4_75 | 99033 | 99788 | + | GT2 |
| pfam | Rep_151_c_4 | Rep_151_c_4_76 | 99806 | 100669 | + | LicD |
| TC | Rep_151_c_4 | Rep_151_c_4_77 | 100872 | 101552 | + | 9.B.18.1.3 |
| TC | Rep_151_c_4 | Rep_151_c_4_78 | 101879 | 103225 | + | 2.A.13.1.3 |
Gene ID: Rep_151_c_4_64
Type: CAZyme
Location: 85160 - 86008 (+)
Type: CAZyme
Location: 85160 - 86008 (+)
Gene ID: Rep_151_c_4_65
Type: pfam
Location: 86191 - 86667 (+)
Type: pfam
Location: 86191 - 86667 (+)
Gene ID: Rep_151_c_4_66
Type:
Location: 86873 - 88039 (+)
Type:
Location: 86873 - 88039 (+)
Gene ID: Rep_151_c_4_67
Type: TC
Location: 88955 - 91630 (+)
Type: TC
Location: 88955 - 91630 (+)
Gene ID: Rep_151_c_4_68
Type:
Location: 91658 - 92707 (+)
Type:
Location: 91658 - 92707 (+)
Gene ID: Rep_151_c_4_69
Type:
Location: 92716 - 94260 (+)
Type:
Location: 92716 - 94260 (+)
Gene ID: Rep_151_c_4_70
Type: TC
Location: 94263 - 95324 (+)
Type: TC
Location: 94263 - 95324 (+)
Gene ID: Rep_151_c_4_71
Type: pfam
Location: 95371 - 95955 (+)
Type: pfam
Location: 95371 - 95955 (+)
Gene ID: Rep_151_c_4_72
Type: CAZyme
Location: 95957 - 96766 (+)
Type: CAZyme
Location: 95957 - 96766 (+)
Gene ID: Rep_151_c_4_73
Type: pfam
Location: 96788 - 97933 (+)
Type: pfam
Location: 96788 - 97933 (+)
Gene ID: Rep_151_c_4_74
Type: CAZyme
Location: 98152 - 98964 (+)
Type: CAZyme
Location: 98152 - 98964 (+)
Gene ID: Rep_151_c_4_75
Type: CAZyme
Location: 99033 - 99788 (+)
Type: CAZyme
Location: 99033 - 99788 (+)
Gene ID: Rep_151_c_4_76
Type: pfam
Location: 99806 - 100669 (+)
Type: pfam
Location: 99806 - 100669 (+)
Gene ID: Rep_151_c_4_77
Type: TC
Location: 100872 - 101552 (+)
Type: TC
Location: 100872 - 101552 (+)
Gene ID: Rep_151_c_4_78
Type: TC
Location: 101879 - 103225 (+)
Type: TC
Location: 101879 - 103225 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900547085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.