Cluster: Rep_151_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_151
- CGC Family ID: CGCFAM_01306
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_151_c_3 | Rep_151_c_3_40 | 46232 | 49798 | - | GH2 |
| CAZyme | Rep_151_c_3 | Rep_151_c_3_41 | 49955 | 51172 | - | GT30 |
| pfam | Rep_151_c_3 | Rep_151_c_3_42 | 51208 | 52746 | - | tRNA-synt_1c | Anticodon_2 |
| STP | Rep_151_c_3 | Rep_151_c_3_43 | 52799 | 55036 | + | HD |
| TC | Rep_151_c_3 | Rep_151_c_3_44 | 55052 | 57322 | - | 3.A.11.3.1 |
Gene ID: Rep_151_c_3_40
Type: CAZyme
Location: 46232 - 49798 (-)
Type: CAZyme
Location: 46232 - 49798 (-)
Gene ID: Rep_151_c_3_41
Type: CAZyme
Location: 49955 - 51172 (-)
Type: CAZyme
Location: 49955 - 51172 (-)
Gene ID: Rep_151_c_3_42
Type: pfam
Location: 51208 - 52746 (-)
Type: pfam
Location: 51208 - 52746 (-)
Gene ID: Rep_151_c_3_43
Type: STP
Location: 52799 - 55036 (+)
Type: STP
Location: 52799 - 55036 (+)
Gene ID: Rep_151_c_3_44
Type: TC
Location: 55052 - 57322 (-)
Type: TC
Location: 55052 - 57322 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900547085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.