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Cluster: Rep_151_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_151_c_15 Rep_151_c_15_46 50778 52055 - GH171
pfam Rep_151_c_15 Rep_151_c_15_47 52024 53361 - MFS_1
CAZyme Rep_151_c_15 Rep_151_c_15_48 53559 54977 - GT2
pfam Rep_151_c_15 Rep_151_c_15_49 55006 56859 - Metallophos | PQQ | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4
NULL(UNKNOWN) Rep_151_c_15 Rep_151_c_15_50 56887 59547 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_151_c_15 Rep_151_c_15_51 59581 61017 - 2.A.21.5.1
CAZyme Rep_151_c_15 Rep_151_c_15_52 61046 62215 - GH171
NULL(UNKNOWN) Rep_151_c_15 Rep_151_c_15_53 62592 63449 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_151_c_15 Rep_151_c_15_54 64161 67499 + 1.B.14.6.1
Gene ID: Rep_151_c_15_46
Type: CAZyme
Location: 50778 - 52055 (-)
Gene ID: Rep_151_c_15_47
Type: pfam
Location: 52024 - 53361 (-)
Gene ID: Rep_151_c_15_48
Type: CAZyme
Location: 53559 - 54977 (-)
Gene ID: Rep_151_c_15_49
Type: pfam
Location: 55006 - 56859 (-)
Gene ID: Rep_151_c_15_50
Type:
Location: 56887 - 59547 (-)
Gene ID: Rep_151_c_15_51
Type: TC
Location: 59581 - 61017 (-)
Gene ID: Rep_151_c_15_52
Type: CAZyme
Location: 61046 - 62215 (-)
Gene ID: Rep_151_c_15_53
Type:
Location: 62592 - 63449 (+)
Gene ID: Rep_151_c_15_54
Type: TC
Location: 64161 - 67499 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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