dbCAN Logo

Cluster: Rep_151_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_151_c_12 Rep_151_c_12_31 36525 37214 - GH3
pfam Rep_151_c_12 Rep_151_c_12_32 37573 38583 + F_bP_aldolase
NULL(UNKNOWN) Rep_151_c_12 Rep_151_c_12_33 39016 39132 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_151_c_12 Rep_151_c_12_34 39829 43014 + 1.B.14.6.2
pfam Rep_151_c_12 Rep_151_c_12_35 43041 44678 + SusD_RagB | SusD-like_3
pfam Rep_151_c_12 Rep_151_c_12_36 44784 45911 + Alk_phosphatase | Metalloenzyme
CAZyme Rep_151_c_12 Rep_151_c_12_37 45999 47669 + GH63
pfam Rep_151_c_12 Rep_151_c_12_38 47690 48529 + ROK
pfam Rep_151_c_12 Rep_151_c_12_39 48560 50011 + Metallophos | PA14
TC Rep_151_c_12 Rep_151_c_12_40 50831 52060 - 2.A.1.7.10
Gene ID: Rep_151_c_12_31
Type: CAZyme
Location: 36525 - 37214 (-)
Gene ID: Rep_151_c_12_32
Type: pfam
Location: 37573 - 38583 (+)
Gene ID: Rep_151_c_12_33
Type:
Location: 39016 - 39132 (+)
Gene ID: Rep_151_c_12_34
Type: TC
Location: 39829 - 43014 (+)
Gene ID: Rep_151_c_12_35
Type: pfam
Location: 43041 - 44678 (+)
Gene ID: Rep_151_c_12_36
Type: pfam
Location: 44784 - 45911 (+)
Gene ID: Rep_151_c_12_37
Type: CAZyme
Location: 45999 - 47669 (+)
Gene ID: Rep_151_c_12_38
Type: pfam
Location: 47690 - 48529 (+)
Gene ID: Rep_151_c_12_39
Type: pfam
Location: 48560 - 50011 (+)
Gene ID: Rep_151_c_12_40
Type: TC
Location: 50831 - 52060 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List