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Cluster: Rep_151_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_151_c_7 Rep_151_c_7_75 72680 73987 - 9.B.168.1.2
peptidase Rep_151_c_7 Rep_151_c_7_76 74115 75722 + C26.964
TC Rep_151_c_7 Rep_151_c_7_77 75730 77625 + 2.A.9.3.1
peptidase Rep_151_c_7 Rep_151_c_7_78 77631 79799 + S09.UPC
TC Rep_151_c_7 Rep_151_c_7_79 79866 81281 + 2.A.1.53.5
TC Rep_151_c_7 Rep_151_c_7_80 81423 83099 - 1.B.9.4.2
NULL(UNKNOWN) Rep_151_c_7 Rep_151_c_7_81 83124 84107 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_151_c_7 Rep_151_c_7_82 84248 85111 + Cons_hypoth95 | MTS | PrmA | Methyltransf_11 | Methyltransf_25 | Methyltransf_31
CAZyme Rep_151_c_7 Rep_151_c_7_83 85420 86247 - GH25
Gene ID: Rep_151_c_7_75
Type: TC
Location: 72680 - 73987 (-)
Gene ID: Rep_151_c_7_76
Type: peptidase
Location: 74115 - 75722 (+)
Gene ID: Rep_151_c_7_77
Type: TC
Location: 75730 - 77625 (+)
Gene ID: Rep_151_c_7_78
Type: peptidase
Location: 77631 - 79799 (+)
Gene ID: Rep_151_c_7_79
Type: TC
Location: 79866 - 81281 (+)
Gene ID: Rep_151_c_7_80
Type: TC
Location: 81423 - 83099 (-)
Gene ID: Rep_151_c_7_81
Type:
Location: 83124 - 84107 (-)
Gene ID: Rep_151_c_7_82
Type: pfam
Location: 84248 - 85111 (+)
Gene ID: Rep_151_c_7_83
Type: CAZyme
Location: 85420 - 86247 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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