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Cluster: Rep_151_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_151_c_0 Rep_151_c_0_10 9646 11679 + 3.A.16.1.1
pfam Rep_151_c_0 Rep_151_c_0_11 11801 12664 + CTP_transf_1
pfam Rep_151_c_0 Rep_151_c_0_12 12858 13940 + Lipase_GDSL_2 | Lipase_GDSL_3 | GxDLY
CAZyme Rep_151_c_0 Rep_151_c_0_13 14249 15397 - GT19
pfam Rep_151_c_0 Rep_151_c_0_14 15489 16292 - SurE
TC Rep_151_c_0 Rep_151_c_0_15 16362 17252 + 8.A.3.2.3
pfam Rep_151_c_0 Rep_151_c_0_16 17385 18293 + ParBc | HTH_ParB | ParB_dimer
pfam Rep_151_c_0 Rep_151_c_0_17 18312 19058 + DUF5683
CAZyme Rep_151_c_0 Rep_151_c_0_18 19101 20468 + GH23
Gene ID: Rep_151_c_0_10
Type: TC
Location: 9646 - 11679 (+)
Gene ID: Rep_151_c_0_11
Type: pfam
Location: 11801 - 12664 (+)
Gene ID: Rep_151_c_0_12
Type: pfam
Location: 12858 - 13940 (+)
Gene ID: Rep_151_c_0_13
Type: CAZyme
Location: 14249 - 15397 (-)
Gene ID: Rep_151_c_0_14
Type: pfam
Location: 15489 - 16292 (-)
Gene ID: Rep_151_c_0_15
Type: TC
Location: 16362 - 17252 (+)
Gene ID: Rep_151_c_0_16
Type: pfam
Location: 17385 - 18293 (+)
Gene ID: Rep_151_c_0_17
Type: pfam
Location: 18312 - 19058 (+)
Gene ID: Rep_151_c_0_18
Type: CAZyme
Location: 19101 - 20468 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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