dbCAN Logo

Cluster: Rep_14_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_14_c_321 Rep_14_c_321_1 2 265 - 3.A.1.2.7
pfam Rep_14_c_321 Rep_14_c_321_2 279 1301 - Bmp
NULL(UNKNOWN) Rep_14_c_321 Rep_14_c_321_3 1680 2462 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_14_c_321 Rep_14_c_321_4 2706 4670 + GH77
CAZyme Rep_14_c_321 Rep_14_c_321_5 4709 8416 + GH13
TC Rep_14_c_321 Rep_14_c_321_6 8739 9542 - 3.A.1.24.5
TC Rep_14_c_321 Rep_14_c_321_7 9594 10265 - 3.A.1.24.5
TC Rep_14_c_321 Rep_14_c_321_8 10267 11286 - 3.A.1.24.1
pfam Rep_14_c_321 Rep_14_c_321_9 11406 12131 - PNP_UDP_1
TC Rep_14_c_321 Rep_14_c_321_10 12267 13571 - 2.A.40.1.4
Gene ID: Rep_14_c_321_1
Type: TC
Location: 2 - 265 (-)
Gene ID: Rep_14_c_321_2
Type: pfam
Location: 279 - 1301 (-)
Gene ID: Rep_14_c_321_3
Type:
Location: 1680 - 2462 (+)
Gene ID: Rep_14_c_321_4
Type: CAZyme
Location: 2706 - 4670 (+)
Gene ID: Rep_14_c_321_5
Type: CAZyme
Location: 4709 - 8416 (+)
Gene ID: Rep_14_c_321_6
Type: TC
Location: 8739 - 9542 (-)
Gene ID: Rep_14_c_321_7
Type: TC
Location: 9594 - 10265 (-)
Gene ID: Rep_14_c_321_8
Type: TC
Location: 10267 - 11286 (-)
Gene ID: Rep_14_c_321_9
Type: pfam
Location: 11406 - 12131 (-)
Gene ID: Rep_14_c_321_10
Type: TC
Location: 12267 - 13571 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List