Cluster: Rep_14_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_14
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_14_c_284 | Rep_14_c_284_10 | 8618 | 10378 | - | CBM34 | GH13_20 |
| STP | Rep_14_c_284 | Rep_14_c_284_11 | 10702 | 11457 | + | CbiA |
| pfam | Rep_14_c_284 | Rep_14_c_284_12 | 11450 | 12355 | + | ParBc | HTH_ParB | ParB_dimer |
| TC | Rep_14_c_284 | Rep_14_c_284_13 | 12442 | 13884 | + | 1.B.52.2.1 |
Gene ID: Rep_14_c_284_10
Type: CAZyme
Location: 8618 - 10378 (-)
Type: CAZyme
Location: 8618 - 10378 (-)
Gene ID: Rep_14_c_284_11
Type: STP
Location: 10702 - 11457 (+)
Type: STP
Location: 10702 - 11457 (+)
Gene ID: Rep_14_c_284_12
Type: pfam
Location: 11450 - 12355 (+)
Type: pfam
Location: 11450 - 12355 (+)
Gene ID: Rep_14_c_284_13
Type: TC
Location: 12442 - 13884 (+)
Type: TC
Location: 12442 - 13884 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Gallitreponema
Species
Gallitreponema excrementavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.