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Cluster: Rep_148_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_148_c_66 Rep_148_c_66_19 19719 21284 + 3.B.1.1.2
NULL(UNKNOWN) Rep_148_c_66 Rep_148_c_66_20 21321 21470 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_148_c_66 Rep_148_c_66_21 21477 21914 + Biotin_lipoyl | Biotin_lipoyl_2
CAZyme Rep_148_c_66 Rep_148_c_66_22 22135 22941 + GT5
pfam Rep_148_c_66 Rep_148_c_66_23 22995 24521 + DUF4270
NULL(UNKNOWN) Rep_148_c_66 Rep_148_c_66_24 24521 24649 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_148_c_66 Rep_148_c_66_25 24952 26223 - 3.D.5.1.1
TC Rep_148_c_66 Rep_148_c_66_26 26233 26841 - 3.D.5.1.1
TC Rep_148_c_66 Rep_148_c_66_27 26844 27476 - 3.D.5.1.1
TC Rep_148_c_66 Rep_148_c_66_28 27483 28181 - 3.D.5.1.1
TC Rep_148_c_66 Rep_148_c_66_29 28178 29353 - 3.D.5.1.1
Gene ID: Rep_148_c_66_19
Type: TC
Location: 19719 - 21284 (+)
Gene ID: Rep_148_c_66_20
Type:
Location: 21321 - 21470 (+)
Gene ID: Rep_148_c_66_21
Type: pfam
Location: 21477 - 21914 (+)
Gene ID: Rep_148_c_66_22
Type: CAZyme
Location: 22135 - 22941 (+)
Gene ID: Rep_148_c_66_23
Type: pfam
Location: 22995 - 24521 (+)
Gene ID: Rep_148_c_66_24
Type:
Location: 24521 - 24649 (+)
Gene ID: Rep_148_c_66_25
Type: TC
Location: 24952 - 26223 (-)
Gene ID: Rep_148_c_66_26
Type: TC
Location: 26233 - 26841 (-)
Gene ID: Rep_148_c_66_27
Type: TC
Location: 26844 - 27476 (-)
Gene ID: Rep_148_c_66_28
Type: TC
Location: 27483 - 28181 (-)
Gene ID: Rep_148_c_66_29
Type: TC
Location: 28178 - 29353 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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