Cluster: Rep_148_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_148
- CGC Family ID: CGCFAM_00241
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_148_c_5 | Rep_148_c_5_3 | 2711 | 4093 | - | 2.A.2.3.7 |
| CAZyme | Rep_148_c_5 | Rep_148_c_5_4 | 4144 | 5319 | - | GH130_1 |
| CAZyme | Rep_148_c_5 | Rep_148_c_5_5 | 5328 | 6365 | - | GH26 |
| CAZyme | Rep_148_c_5 | Rep_148_c_5_6 | 6566 | 7852 | - | CE7 |
| NULL(UNKNOWN) | Rep_148_c_5 | Rep_148_c_5_7 | 8448 | 8609 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_148_c_5 | Rep_148_c_5_8 | 8687 | 10123 | + | CE20 |
| CAZyme | Rep_148_c_5 | Rep_148_c_5_9 | 10172 | 12364 | + | GH36 |
| CAZyme | Rep_148_c_5 | Rep_148_c_5_10 | 12456 | 14765 | - | GH9 |
Gene ID: Rep_148_c_5_3
Type: TC
Location: 2711 - 4093 (-)
Type: TC
Location: 2711 - 4093 (-)
Gene ID: Rep_148_c_5_4
Type: CAZyme
Location: 4144 - 5319 (-)
Type: CAZyme
Location: 4144 - 5319 (-)
Gene ID: Rep_148_c_5_5
Type: CAZyme
Location: 5328 - 6365 (-)
Type: CAZyme
Location: 5328 - 6365 (-)
Gene ID: Rep_148_c_5_6
Type: CAZyme
Location: 6566 - 7852 (-)
Type: CAZyme
Location: 6566 - 7852 (-)
Gene ID: Rep_148_c_5_7
Type:
Location: 8448 - 8609 (-)
Type:
Location: 8448 - 8609 (-)
Gene ID: Rep_148_c_5_8
Type: CAZyme
Location: 8687 - 10123 (+)
Type: CAZyme
Location: 8687 - 10123 (+)
Gene ID: Rep_148_c_5_9
Type: CAZyme
Location: 10172 - 12364 (+)
Type: CAZyme
Location: 10172 - 12364 (+)
Gene ID: Rep_148_c_5_10
Type: CAZyme
Location: 12456 - 14765 (-)
Type: CAZyme
Location: 12456 - 14765 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella colorans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.