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Cluster: Rep_148_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_148_c_62 Rep_148_c_62_4 2021 4366 - GH20
TC Rep_148_c_62 Rep_148_c_62_5 4928 6244 - 2.A.33.1.2
pfam Rep_148_c_62 Rep_148_c_62_6 6458 8818 - FtsX | FtsX | MacB_PCD | MacB_PCD
pfam Rep_148_c_62 Rep_148_c_62_7 8821 11214 - FtsX | FtsX | MacB_PCD
TC Rep_148_c_62 Rep_148_c_62_8 11224 11904 - 3.A.1.122.14
pfam Rep_148_c_62 Rep_148_c_62_9 11923 13170 - HlyD_3 | Biotin_lipoyl_2
pfam Rep_148_c_62 Rep_148_c_62_10 13155 14456 - OEP | OEP
CAZyme Rep_148_c_62 Rep_148_c_62_11 14765 16177 + GH13_28
Gene ID: Rep_148_c_62_4
Type: CAZyme
Location: 2021 - 4366 (-)
Gene ID: Rep_148_c_62_5
Type: TC
Location: 4928 - 6244 (-)
Gene ID: Rep_148_c_62_6
Type: pfam
Location: 6458 - 8818 (-)
Gene ID: Rep_148_c_62_7
Type: pfam
Location: 8821 - 11214 (-)
Gene ID: Rep_148_c_62_8
Type: TC
Location: 11224 - 11904 (-)
Gene ID: Rep_148_c_62_9
Type: pfam
Location: 11923 - 13170 (-)
Gene ID: Rep_148_c_62_10
Type: pfam
Location: 13155 - 14456 (-)
Gene ID: Rep_148_c_62_11
Type: CAZyme
Location: 14765 - 16177 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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