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Cluster: Rep_148_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_148_c_51 Rep_148_c_51_2 304 2802 - GH13_6
NULL(UNKNOWN) Rep_148_c_51 Rep_148_c_51_3 3056 3391 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_148_c_51 Rep_148_c_51_4 4054 4695 - SLFN_AlbA_2
TC Rep_148_c_51 Rep_148_c_51_5 4734 5669 - 2.A.115.1.1
NULL(UNKNOWN) Rep_148_c_51 Rep_148_c_51_6 5907 6002 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_148_c_51 Rep_148_c_51_7 6063 8309 + PHO4
TC Rep_148_c_51 Rep_148_c_51_8 8551 11388 + 1.B.14.12.1
pfam Rep_148_c_51 Rep_148_c_51_9 11428 12366 + Metallophos
TC Rep_148_c_51 Rep_148_c_51_10 12619 15366 + 1.B.14.12.3
Gene ID: Rep_148_c_51_2
Type: CAZyme
Location: 304 - 2802 (-)
Gene ID: Rep_148_c_51_3
Type:
Location: 3056 - 3391 (-)
Gene ID: Rep_148_c_51_4
Type: pfam
Location: 4054 - 4695 (-)
Gene ID: Rep_148_c_51_5
Type: TC
Location: 4734 - 5669 (-)
Gene ID: Rep_148_c_51_6
Type:
Location: 5907 - 6002 (+)
Gene ID: Rep_148_c_51_7
Type: pfam
Location: 6063 - 8309 (+)
Gene ID: Rep_148_c_51_8
Type: TC
Location: 8551 - 11388 (+)
Gene ID: Rep_148_c_51_9
Type: pfam
Location: 11428 - 12366 (+)
Gene ID: Rep_148_c_51_10
Type: TC
Location: 12619 - 15366 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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