Cluster: Rep_148_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_148
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_148_c_3 | Rep_148_c_3_30 | 39357 | 40250 | + | 3.A.1.105.4 |
| TC | Rep_148_c_3 | Rep_148_c_3_31 | 40257 | 41726 | + | 3.A.1.105.15 |
| TC | Rep_148_c_3 | Rep_148_c_3_32 | 41742 | 42836 | + | 3.A.1.105.4 |
| TC | Rep_148_c_3 | Rep_148_c_3_33 | 42833 | 43921 | + | 3.A.1.105.4 |
| CAZyme | Rep_148_c_3 | Rep_148_c_3_34 | 44017 | 45189 | - | GH23 |
Gene ID: Rep_148_c_3_30
Type: TC
Location: 39357 - 40250 (+)
Type: TC
Location: 39357 - 40250 (+)
Gene ID: Rep_148_c_3_31
Type: TC
Location: 40257 - 41726 (+)
Type: TC
Location: 40257 - 41726 (+)
Gene ID: Rep_148_c_3_32
Type: TC
Location: 41742 - 42836 (+)
Type: TC
Location: 41742 - 42836 (+)
Gene ID: Rep_148_c_3_33
Type: TC
Location: 42833 - 43921 (+)
Type: TC
Location: 42833 - 43921 (+)
Gene ID: Rep_148_c_3_34
Type: CAZyme
Location: 44017 - 45189 (-)
Type: CAZyme
Location: 44017 - 45189 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella colorans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.