Cluster: Rep_148_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_148
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_148_c_37 | Rep_148_c_37_25 | 28942 | 29910 | + | CBM50 |
| CAZyme | Rep_148_c_37 | Rep_148_c_37_26 | 30038 | 30820 | - | GT2 |
| CAZyme | Rep_148_c_37 | Rep_148_c_37_27 | 30817 | 32091 | - | GT4 |
| pfam | Rep_148_c_37 | Rep_148_c_37_28 | 32608 | 33087 | - | YgbB |
| TC | Rep_148_c_37 | Rep_148_c_37_29 | 33127 | 34314 | - | 1.B.57.4.6 |
Gene ID: Rep_148_c_37_25
Type: CAZyme
Location: 28942 - 29910 (+)
Type: CAZyme
Location: 28942 - 29910 (+)
Gene ID: Rep_148_c_37_26
Type: CAZyme
Location: 30038 - 30820 (-)
Type: CAZyme
Location: 30038 - 30820 (-)
Gene ID: Rep_148_c_37_27
Type: CAZyme
Location: 30817 - 32091 (-)
Type: CAZyme
Location: 30817 - 32091 (-)
Gene ID: Rep_148_c_37_28
Type: pfam
Location: 32608 - 33087 (-)
Type: pfam
Location: 32608 - 33087 (-)
Gene ID: Rep_148_c_37_29
Type: TC
Location: 33127 - 34314 (-)
Type: TC
Location: 33127 - 34314 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella colorans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.