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Cluster: Rep_148_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_148_c_30 Rep_148_c_30_27 27371 28339 - GT2
TC Rep_148_c_30 Rep_148_c_30_28 28616 30448 + 3.A.1.106.1
pfam Rep_148_c_30 Rep_148_c_30_29 30499 32508 + Sulfatase
pfam Rep_148_c_30 Rep_148_c_30_30 32505 33428 + Lip_A_acyltrans
CAZyme Rep_148_c_30 Rep_148_c_30_31 33494 34660 + GT4
CAZyme Rep_148_c_30 Rep_148_c_30_32 34675 35394 + GT2
pfam Rep_148_c_30 Rep_148_c_30_33 35423 36604 + Glycos_transf_1 | Glyco_trans_1_2 | Glyco_trans_1_4 | GT4-conflict
CAZyme Rep_148_c_30 Rep_148_c_30_34 36619 37626 + GT90
Gene ID: Rep_148_c_30_27
Type: CAZyme
Location: 27371 - 28339 (-)
Gene ID: Rep_148_c_30_28
Type: TC
Location: 28616 - 30448 (+)
Gene ID: Rep_148_c_30_29
Type: pfam
Location: 30499 - 32508 (+)
Gene ID: Rep_148_c_30_30
Type: pfam
Location: 32505 - 33428 (+)
Gene ID: Rep_148_c_30_31
Type: CAZyme
Location: 33494 - 34660 (+)
Gene ID: Rep_148_c_30_32
Type: CAZyme
Location: 34675 - 35394 (+)
Gene ID: Rep_148_c_30_33
Type: pfam
Location: 35423 - 36604 (+)
Gene ID: Rep_148_c_30_34
Type: CAZyme
Location: 36619 - 37626 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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