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Cluster: Rep_1373_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1373_c_1 Rep_1373_c_1_21 23269 24510 + GT51
pfam Rep_1373_c_1 Rep_1373_c_1_22 24558 24974 + DUF3785
pfam Rep_1373_c_1 Rep_1373_c_1_23 25096 26160 + Acetate_kinase
TC Rep_1373_c_1 Rep_1373_c_1_24 26299 27759 - 2.A.114.1.2
Gene ID: Rep_1373_c_1_21
Type: CAZyme
Location: 23269 - 24510 (+)
Gene ID: Rep_1373_c_1_22
Type: pfam
Location: 24558 - 24974 (+)
Gene ID: Rep_1373_c_1_23
Type: pfam
Location: 25096 - 26160 (+)
Gene ID: Rep_1373_c_1_24
Type: TC
Location: 26299 - 27759 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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