Cluster: Rep_135_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_135
- CGC Family ID: CGCFAM_00038
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_135_c_283 | Rep_135_c_283_1 | 2 | 826 | + | GT2 |
| NULL(UNKNOWN) | Rep_135_c_283 | Rep_135_c_283_2 | 823 | 2130 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_135_c_283 | Rep_135_c_283_3 | 2147 | 3286 | + | GT4 |
| CAZyme | Rep_135_c_283 | Rep_135_c_283_4 | 3341 | 4585 | + | GT4 |
| CAZyme | Rep_135_c_283 | Rep_135_c_283_5 | 4626 | 5768 | + | GT4 |
| TC | Rep_135_c_283 | Rep_135_c_283_6 | 5746 | 6414 | + | 9.B.18.1.1 |
Gene ID: Rep_135_c_283_1
Type: CAZyme
Location: 2 - 826 (+)
Type: CAZyme
Location: 2 - 826 (+)
Gene ID: Rep_135_c_283_2
Type:
Location: 823 - 2130 (+)
Type:
Location: 823 - 2130 (+)
Gene ID: Rep_135_c_283_3
Type: CAZyme
Location: 2147 - 3286 (+)
Type: CAZyme
Location: 2147 - 3286 (+)
Gene ID: Rep_135_c_283_4
Type: CAZyme
Location: 3341 - 4585 (+)
Type: CAZyme
Location: 3341 - 4585 (+)
Gene ID: Rep_135_c_283_5
Type: CAZyme
Location: 4626 - 5768 (+)
Type: CAZyme
Location: 4626 - 5768 (+)
Gene ID: Rep_135_c_283_6
Type: TC
Location: 5746 - 6414 (+)
Type: TC
Location: 5746 - 6414 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella pullistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.