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Cluster: Rep_1355_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1355_c_18 Rep_1355_c_18_59 59581 61011 - 2.A.2.3.2
CAZyme Rep_1355_c_18 Rep_1355_c_18_60 61043 62233 - GH88
sulfatase Rep_1355_c_18 Rep_1355_c_18_61 62253 63662 - S1_27
CAZyme Rep_1355_c_18 Rep_1355_c_18_62 63910 66321 - PL8
pfam Rep_1355_c_18 Rep_1355_c_18_63 66348 70307 - Autotransporter
pfam Rep_1355_c_18 Rep_1355_c_18_64 70601 71563 - Porin_OmpG_1_2
TC Rep_1355_c_18 Rep_1355_c_18_65 71838 73409 - 3.A.1.1.10
pfam Rep_1355_c_18 Rep_1355_c_18_66 73627 74463 - KduI
sulfatase Rep_1355_c_18 Rep_1355_c_18_67 74523 75305 - S1_4
CAZyme Rep_1355_c_18 Rep_1355_c_18_68 75537 77498 - PL8
CAZyme Rep_1355_c_18 Rep_1355_c_18_69 77737 79734 - PL8
Gene ID: Rep_1355_c_18_59
Type: TC
Location: 59581 - 61011 (-)
Gene ID: Rep_1355_c_18_60
Type: CAZyme
Location: 61043 - 62233 (-)
Gene ID: Rep_1355_c_18_61
Type: sulfatase
Location: 62253 - 63662 (-)
Gene ID: Rep_1355_c_18_62
Type: CAZyme
Location: 63910 - 66321 (-)
Gene ID: Rep_1355_c_18_63
Type: pfam
Location: 66348 - 70307 (-)
Gene ID: Rep_1355_c_18_64
Type: pfam
Location: 70601 - 71563 (-)
Gene ID: Rep_1355_c_18_65
Type: TC
Location: 71838 - 73409 (-)
Gene ID: Rep_1355_c_18_66
Type: pfam
Location: 73627 - 74463 (-)
Gene ID: Rep_1355_c_18_67
Type: sulfatase
Location: 74523 - 75305 (-)
Gene ID: Rep_1355_c_18_68
Type: CAZyme
Location: 75537 - 77498 (-)
Gene ID: Rep_1355_c_18_69
Type: CAZyme
Location: 77737 - 79734 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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