Cluster: Rep_1353_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1353
- CGC Family ID: CGCFAM_05232
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1353_c_49 | Rep_1353_c_49_9 | 8050 | 8643 | + | 2.A.76.1.7 |
| TC | Rep_1353_c_49 | Rep_1353_c_49_10 | 8914 | 10152 | - | 1.I.1.1.3 |
| TC | Rep_1353_c_49 | Rep_1353_c_49_11 | 10226 | 11134 | - | 9.B.34.1.3 |
| NULL(UNKNOWN) | Rep_1353_c_49 | Rep_1353_c_49_12 | 11353 | 11607 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_1353_c_49 | Rep_1353_c_49_13 | 11756 | 11986 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1353_c_49 | Rep_1353_c_49_14 | 12024 | 12719 | - | CE4 |
Gene ID: Rep_1353_c_49_9
Type: TC
Location: 8050 - 8643 (+)
Type: TC
Location: 8050 - 8643 (+)
Gene ID: Rep_1353_c_49_10
Type: TC
Location: 8914 - 10152 (-)
Type: TC
Location: 8914 - 10152 (-)
Gene ID: Rep_1353_c_49_11
Type: TC
Location: 10226 - 11134 (-)
Type: TC
Location: 10226 - 11134 (-)
Gene ID: Rep_1353_c_49_12
Type:
Location: 11353 - 11607 (+)
Type:
Location: 11353 - 11607 (+)
Gene ID: Rep_1353_c_49_13
Type:
Location: 11756 - 11986 (+)
Type:
Location: 11756 - 11986 (+)
Gene ID: Rep_1353_c_49_14
Type: CAZyme
Location: 12024 - 12719 (-)
Type: CAZyme
Location: 12024 - 12719 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Cetobacterium_A
Species
Cetobacterium_A sp905216205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.