dbCAN Logo

Cluster: Rep_1353_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1353_c_0 Rep_1353_c_0_211 200827 202218 - GT83
pfam Rep_1353_c_0 Rep_1353_c_0_212 202235 203557 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam Rep_1353_c_0 Rep_1353_c_0_213 203559 204596 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd | GDP_Man_Dehyd
TC Rep_1353_c_0 Rep_1353_c_0_214 204597 204878 - 2.A.123.4.1
CAZyme Rep_1353_c_0 Rep_1353_c_0_215 204881 205582 - GT2
TF Rep_1353_c_0 Rep_1353_c_0_216 205779 206456 + Trans_reg_C
STP Rep_1353_c_0 Rep_1353_c_0_217 206458 207804 + HATPase_c | HisKA
CAZyme Rep_1353_c_0 Rep_1353_c_0_218 207844 209406 + GT83
Gene ID: Rep_1353_c_0_211
Type: CAZyme
Location: 200827 - 202218 (-)
Gene ID: Rep_1353_c_0_212
Type: pfam
Location: 202235 - 203557 (-)
Gene ID: Rep_1353_c_0_213
Type: pfam
Location: 203559 - 204596 (-)
Gene ID: Rep_1353_c_0_214
Type: TC
Location: 204597 - 204878 (-)
Gene ID: Rep_1353_c_0_215
Type: CAZyme
Location: 204881 - 205582 (-)
Gene ID: Rep_1353_c_0_216
Type: TF
Location: 205779 - 206456 (+)
Gene ID: Rep_1353_c_0_217
Type: STP
Location: 206458 - 207804 (+)
Gene ID: Rep_1353_c_0_218
Type: CAZyme
Location: 207844 - 209406 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List