Cluster: Rep_1353_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1353
- CGC Family ID: CGCFAM_00770
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1353_c_36 | Rep_1353_c_36_26 | 25488 | 26318 | - | 3.A.1.29.1 |
| TC | Rep_1353_c_36 | Rep_1353_c_36_27 | 26318 | 28006 | - | 3.A.1.29.1 |
| TC | Rep_1353_c_36 | Rep_1353_c_36_28 | 28025 | 28624 | - | 3.A.1.29.1 |
| pfam | Rep_1353_c_36 | Rep_1353_c_36_29 | 28621 | 29286 | - | YgjP-like |
| CAZyme | Rep_1353_c_36 | Rep_1353_c_36_30 | 29470 | 32421 | + | GH2 |
| TC | Rep_1353_c_36 | Rep_1353_c_36_31 | 32539 | 34146 | + | 3.A.1.120.6 |
Gene ID: Rep_1353_c_36_26
Type: TC
Location: 25488 - 26318 (-)
Type: TC
Location: 25488 - 26318 (-)
Gene ID: Rep_1353_c_36_27
Type: TC
Location: 26318 - 28006 (-)
Type: TC
Location: 26318 - 28006 (-)
Gene ID: Rep_1353_c_36_28
Type: TC
Location: 28025 - 28624 (-)
Type: TC
Location: 28025 - 28624 (-)
Gene ID: Rep_1353_c_36_29
Type: pfam
Location: 28621 - 29286 (-)
Type: pfam
Location: 28621 - 29286 (-)
Gene ID: Rep_1353_c_36_30
Type: CAZyme
Location: 29470 - 32421 (+)
Type: CAZyme
Location: 29470 - 32421 (+)
Gene ID: Rep_1353_c_36_31
Type: TC
Location: 32539 - 34146 (+)
Type: TC
Location: 32539 - 34146 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Cetobacterium_A
Species
Cetobacterium_A sp905216205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.