Cluster: Rep_1353_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1353
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1353_c_36 | Rep_1353_c_36_12 | 11733 | 12719 | + | 2.A.56.1.3 |
| TC | Rep_1353_c_36 | Rep_1353_c_36_13 | 12744 | 13271 | + | 2.A.56.1.3 |
| TC | Rep_1353_c_36 | Rep_1353_c_36_14 | 13265 | 14548 | + | 2.A.56.1.3 |
| CAZyme | Rep_1353_c_36 | Rep_1353_c_36_15 | 14555 | 15505 | + | CE7 |
| pfam | Rep_1353_c_36 | Rep_1353_c_36_16 | 15523 | 16392 | + | DHDPS |
| pfam | Rep_1353_c_36 | Rep_1353_c_36_17 | 16403 | 17302 | + | ROK |
| TC | Rep_1353_c_36 | Rep_1353_c_36_18 | 17696 | 19069 | + | 2.A.25.1.5 |
Gene ID: Rep_1353_c_36_12
Type: TC
Location: 11733 - 12719 (+)
Type: TC
Location: 11733 - 12719 (+)
Gene ID: Rep_1353_c_36_13
Type: TC
Location: 12744 - 13271 (+)
Type: TC
Location: 12744 - 13271 (+)
Gene ID: Rep_1353_c_36_14
Type: TC
Location: 13265 - 14548 (+)
Type: TC
Location: 13265 - 14548 (+)
Gene ID: Rep_1353_c_36_15
Type: CAZyme
Location: 14555 - 15505 (+)
Type: CAZyme
Location: 14555 - 15505 (+)
Gene ID: Rep_1353_c_36_16
Type: pfam
Location: 15523 - 16392 (+)
Type: pfam
Location: 15523 - 16392 (+)
Gene ID: Rep_1353_c_36_17
Type: pfam
Location: 16403 - 17302 (+)
Type: pfam
Location: 16403 - 17302 (+)
Gene ID: Rep_1353_c_36_18
Type: TC
Location: 17696 - 19069 (+)
Type: TC
Location: 17696 - 19069 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Cetobacterium_A
Species
Cetobacterium_A sp905216205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.