dbCAN Logo

Cluster: Rep_1353_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1353_c_34 Rep_1353_c_34_2 1502 2506 + 3.A.1.2.26
TC Rep_1353_c_34 Rep_1353_c_34_3 2525 4045 + 3.A.1.2.26
TC Rep_1353_c_34 Rep_1353_c_34_4 4048 5223 + 3.A.1.2.26
pfam Rep_1353_c_34 Rep_1353_c_34_5 5236 6684 + FGGY_N | FGGY_C
TC Rep_1353_c_34 Rep_1353_c_34_6 6833 8596 + 3.D.10.1.4
TC Rep_1353_c_34 Rep_1353_c_34_7 8719 9504 + 2.A.102.4.4
pfam Rep_1353_c_34 Rep_1353_c_34_8 9548 10168 + DUF1847
TC Rep_1353_c_34 Rep_1353_c_34_9 10223 11761 - 2.A.3.7.5
TC Rep_1353_c_34 Rep_1353_c_34_10 11919 12947 + 9.A.23.1.1
TC Rep_1353_c_34 Rep_1353_c_34_11 12967 13665 + 9.B.120.1.3
TC Rep_1353_c_34 Rep_1353_c_34_12 13819 14739 + 3.A.1.5.2
TC Rep_1353_c_34 Rep_1353_c_34_13 14749 15759 + 3.A.1.5.2
TC Rep_1353_c_34 Rep_1353_c_34_14 15762 16754 + 3.A.1.5.19
TC Rep_1353_c_34 Rep_1353_c_34_15 16764 17744 + 3.A.1.5.20
TC Rep_1353_c_34 Rep_1353_c_34_16 17757 19406 + 3.A.1.5.2
TC Rep_1353_c_34 Rep_1353_c_34_17 19524 21467 + 2.A.72.1.3
CAZyme Rep_1353_c_34 Rep_1353_c_34_18 21503 22012 - GH23
Gene ID: Rep_1353_c_34_2
Type: TC
Location: 1502 - 2506 (+)
Gene ID: Rep_1353_c_34_3
Type: TC
Location: 2525 - 4045 (+)
Gene ID: Rep_1353_c_34_4
Type: TC
Location: 4048 - 5223 (+)
Gene ID: Rep_1353_c_34_5
Type: pfam
Location: 5236 - 6684 (+)
Gene ID: Rep_1353_c_34_6
Type: TC
Location: 6833 - 8596 (+)
Gene ID: Rep_1353_c_34_7
Type: TC
Location: 8719 - 9504 (+)
Gene ID: Rep_1353_c_34_8
Type: pfam
Location: 9548 - 10168 (+)
Gene ID: Rep_1353_c_34_9
Type: TC
Location: 10223 - 11761 (-)
Gene ID: Rep_1353_c_34_10
Type: TC
Location: 11919 - 12947 (+)
Gene ID: Rep_1353_c_34_11
Type: TC
Location: 12967 - 13665 (+)
Gene ID: Rep_1353_c_34_12
Type: TC
Location: 13819 - 14739 (+)
Gene ID: Rep_1353_c_34_13
Type: TC
Location: 14749 - 15759 (+)
Gene ID: Rep_1353_c_34_14
Type: TC
Location: 15762 - 16754 (+)
Gene ID: Rep_1353_c_34_15
Type: TC
Location: 16764 - 17744 (+)
Gene ID: Rep_1353_c_34_16
Type: TC
Location: 17757 - 19406 (+)
Gene ID: Rep_1353_c_34_17
Type: TC
Location: 19524 - 21467 (+)
Gene ID: Rep_1353_c_34_18
Type: CAZyme
Location: 21503 - 22012 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List