Cluster: Rep_1353_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1353
- CGC Family ID: CGCFAM_06127
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1353_c_23 | Rep_1353_c_23_13 | 11531 | 12934 | + | 4.A.1.2.1 |
| CAZyme | Rep_1353_c_23 | Rep_1353_c_23_14 | 12938 | 14290 | + | GH32 |
| pfam | Rep_1353_c_23 | Rep_1353_c_23_15 | 14303 | 15169 | + | ROK |
| TC | Rep_1353_c_23 | Rep_1353_c_23_16 | 15217 | 16509 | - | 4.A.3.2.6 |
Gene ID: Rep_1353_c_23_13
Type: TC
Location: 11531 - 12934 (+)
Type: TC
Location: 11531 - 12934 (+)
Gene ID: Rep_1353_c_23_14
Type: CAZyme
Location: 12938 - 14290 (+)
Type: CAZyme
Location: 12938 - 14290 (+)
Gene ID: Rep_1353_c_23_15
Type: pfam
Location: 14303 - 15169 (+)
Type: pfam
Location: 14303 - 15169 (+)
Gene ID: Rep_1353_c_23_16
Type: TC
Location: 15217 - 16509 (-)
Type: TC
Location: 15217 - 16509 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Cetobacterium_A
Species
Cetobacterium_A sp905216205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.