Cluster: Rep_1353_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: Rep_1353
- CGC Family ID: CGCFAM_00931
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1353_c_13 | Rep_1353_c_13_10 | 9912 | 11039 | + | 2.A.118.1.2 |
| TC | Rep_1353_c_13 | Rep_1353_c_13_11 | 11474 | 12457 | - | 8.A.5.1.4 |
| CAZyme | Rep_1353_c_13 | Rep_1353_c_13_12 | 12468 | 13799 | - | GH4 |
| TC | Rep_1353_c_13 | Rep_1353_c_13_13 | 13818 | 15413 | - | 4.A.1.1.16 |
Gene ID: Rep_1353_c_13_10
Type: TC
Location: 9912 - 11039 (+)
Type: TC
Location: 9912 - 11039 (+)
Gene ID: Rep_1353_c_13_11
Type: TC
Location: 11474 - 12457 (-)
Type: TC
Location: 11474 - 12457 (-)
Gene ID: Rep_1353_c_13_12
Type: CAZyme
Location: 12468 - 13799 (-)
Type: CAZyme
Location: 12468 - 13799 (-)
Gene ID: Rep_1353_c_13_13
Type: TC
Location: 13818 - 15413 (-)
Type: TC
Location: 13818 - 15413 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Cetobacterium_A
Species
Cetobacterium_A sp905216205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.