Cluster: Rep_1353_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1353
- CGC Family ID: CGCFAM_02074
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1353_c_11 | Rep_1353_c_11_59 | 63509 | 64450 | + | 2.A.16.6.2 |
| pfam | Rep_1353_c_11 | Rep_1353_c_11_60 | 64504 | 65292 | - | Exo_endo_phos |
| TC | Rep_1353_c_11 | Rep_1353_c_11_61 | 65300 | 66937 | - | 4.A.1.1.17 |
| CAZyme | Rep_1353_c_11 | Rep_1353_c_11_62 | 66960 | 68609 | - | GH13_31 |
| TF | Rep_1353_c_11 | Rep_1353_c_11_63 | 68766 | 69737 | - | LacI |
| TC | Rep_1353_c_11 | Rep_1353_c_11_64 | 69949 | 71574 | + | 4.A.1.1.4 |
| CAZyme | Rep_1353_c_11 | Rep_1353_c_11_65 | 71586 | 72911 | + | GH4 |
Gene ID: Rep_1353_c_11_59
Type: TC
Location: 63509 - 64450 (+)
Type: TC
Location: 63509 - 64450 (+)
Gene ID: Rep_1353_c_11_60
Type: pfam
Location: 64504 - 65292 (-)
Type: pfam
Location: 64504 - 65292 (-)
Gene ID: Rep_1353_c_11_61
Type: TC
Location: 65300 - 66937 (-)
Type: TC
Location: 65300 - 66937 (-)
Gene ID: Rep_1353_c_11_62
Type: CAZyme
Location: 66960 - 68609 (-)
Type: CAZyme
Location: 66960 - 68609 (-)
Gene ID: Rep_1353_c_11_63
Type: TF
Location: 68766 - 69737 (-)
Type: TF
Location: 68766 - 69737 (-)
Gene ID: Rep_1353_c_11_64
Type: TC
Location: 69949 - 71574 (+)
Type: TC
Location: 69949 - 71574 (+)
Gene ID: Rep_1353_c_11_65
Type: CAZyme
Location: 71586 - 72911 (+)
Type: CAZyme
Location: 71586 - 72911 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Cetobacterium_A
Species
Cetobacterium_A sp905216205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.