Cluster: Rep_1353_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1353
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1353_c_11 | Rep_1353_c_11_26 | 27375 | 28730 | - | 2.A.2.1.1 |
| CAZyme | Rep_1353_c_11 | Rep_1353_c_11_27 | 28751 | 30946 | - | GH36 |
| TF | Rep_1353_c_11 | Rep_1353_c_11_28 | 30959 | 31984 | - | LacI |
| TC | Rep_1353_c_11 | Rep_1353_c_11_29 | 32207 | 34750 | + | 2.A.1.3.42 |
| STP | Rep_1353_c_11 | Rep_1353_c_11_30 | 34773 | 35186 | + | Rhodanese |
| TC | Rep_1353_c_11 | Rep_1353_c_11_31 | 35225 | 36574 | - | 2.A.1.1.120 |
Gene ID: Rep_1353_c_11_26
Type: TC
Location: 27375 - 28730 (-)
Type: TC
Location: 27375 - 28730 (-)
Gene ID: Rep_1353_c_11_27
Type: CAZyme
Location: 28751 - 30946 (-)
Type: CAZyme
Location: 28751 - 30946 (-)
Gene ID: Rep_1353_c_11_28
Type: TF
Location: 30959 - 31984 (-)
Type: TF
Location: 30959 - 31984 (-)
Gene ID: Rep_1353_c_11_29
Type: TC
Location: 32207 - 34750 (+)
Type: TC
Location: 32207 - 34750 (+)
Gene ID: Rep_1353_c_11_30
Type: STP
Location: 34773 - 35186 (+)
Type: STP
Location: 34773 - 35186 (+)
Gene ID: Rep_1353_c_11_31
Type: TC
Location: 35225 - 36574 (-)
Type: TC
Location: 35225 - 36574 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Cetobacterium_A
Species
Cetobacterium_A sp905216205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.