Cluster: Rep_1353_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1353
- CGC Family ID: CGCFAM_02780
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1353_c_7 | Rep_1353_c_7_3 | 1877 | 2644 | - | 2.A.102.4.4 |
| TC | Rep_1353_c_7 | Rep_1353_c_7_4 | 2676 | 3212 | - | 2.A.51.1.6 |
| TC | Rep_1353_c_7 | Rep_1353_c_7_5 | 3209 | 3739 | - | 2.A.51.1.6 |
| TC | Rep_1353_c_7 | Rep_1353_c_7_6 | 3799 | 5421 | - | 3.A.1.121.4 |
| pfam | Rep_1353_c_7 | Rep_1353_c_7_7 | 5587 | 6543 | + | Oxidored_FMN | Oxidored_FMN |
| CAZyme | Rep_1353_c_7 | Rep_1353_c_7_8 | 6543 | 7706 | + | GT104 |
Gene ID: Rep_1353_c_7_3
Type: TC
Location: 1877 - 2644 (-)
Type: TC
Location: 1877 - 2644 (-)
Gene ID: Rep_1353_c_7_4
Type: TC
Location: 2676 - 3212 (-)
Type: TC
Location: 2676 - 3212 (-)
Gene ID: Rep_1353_c_7_5
Type: TC
Location: 3209 - 3739 (-)
Type: TC
Location: 3209 - 3739 (-)
Gene ID: Rep_1353_c_7_6
Type: TC
Location: 3799 - 5421 (-)
Type: TC
Location: 3799 - 5421 (-)
Gene ID: Rep_1353_c_7_7
Type: pfam
Location: 5587 - 6543 (+)
Type: pfam
Location: 5587 - 6543 (+)
Gene ID: Rep_1353_c_7_8
Type: CAZyme
Location: 6543 - 7706 (+)
Type: CAZyme
Location: 6543 - 7706 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Cetobacterium_A
Species
Cetobacterium_A sp905216205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.