Cluster: Rep_1352_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1352
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1352_c_73 | Rep_1352_c_73_2 | 640 | 1542 | - | GT11 |
| STP | Rep_1352_c_73 | Rep_1352_c_73_3 | 1544 | 2722 | - | Fer4 |
| pfam | Rep_1352_c_73 | Rep_1352_c_73_4 | 2703 | 3848 | - | PS_pyruv_trans |
| CAZyme | Rep_1352_c_73 | Rep_1352_c_73_5 | 3890 | 4633 | - | GT2 |
| TC | Rep_1352_c_73 | Rep_1352_c_73_6 | 4635 | 5267 | - | 9.B.18.1.3 |
Gene ID: Rep_1352_c_73_2
Type: CAZyme
Location: 640 - 1542 (-)
Type: CAZyme
Location: 640 - 1542 (-)
Gene ID: Rep_1352_c_73_3
Type: STP
Location: 1544 - 2722 (-)
Type: STP
Location: 1544 - 2722 (-)
Gene ID: Rep_1352_c_73_4
Type: pfam
Location: 2703 - 3848 (-)
Type: pfam
Location: 2703 - 3848 (-)
Gene ID: Rep_1352_c_73_5
Type: CAZyme
Location: 3890 - 4633 (-)
Type: CAZyme
Location: 3890 - 4633 (-)
Gene ID: Rep_1352_c_73_6
Type: TC
Location: 4635 - 5267 (-)
Type: TC
Location: 4635 - 5267 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium
Species
Fusobacterium simiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.