Cluster: Rep_1352_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1352
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1352_c_66 | Rep_1352_c_66_1 | 208 | 1722 | + | 2.A.118.1.7 |
| pfam | Rep_1352_c_66 | Rep_1352_c_66_2 | 1862 | 2671 | + | Hydrolase | S6PP | Hydrolase_3 |
| pfam | Rep_1352_c_66 | Rep_1352_c_66_3 | 2732 | 3625 | + | Radical_SAM |
| CAZyme | Rep_1352_c_66 | Rep_1352_c_66_4 | 3636 | 5438 | + | CE4 |
Gene ID: Rep_1352_c_66_1
Type: TC
Location: 208 - 1722 (+)
Type: TC
Location: 208 - 1722 (+)
Gene ID: Rep_1352_c_66_2
Type: pfam
Location: 1862 - 2671 (+)
Type: pfam
Location: 1862 - 2671 (+)
Gene ID: Rep_1352_c_66_3
Type: pfam
Location: 2732 - 3625 (+)
Type: pfam
Location: 2732 - 3625 (+)
Gene ID: Rep_1352_c_66_4
Type: CAZyme
Location: 3636 - 5438 (+)
Type: CAZyme
Location: 3636 - 5438 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium
Species
Fusobacterium simiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.