Cluster: Rep_1352_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1352
- CGC Family ID: CGCFAM_02685
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1352_c_121 | Rep_1352_c_121_2 | 653 | 1768 | - | CBM50 | CBM50 |
| TC | Rep_1352_c_121 | Rep_1352_c_121_3 | 1795 | 3036 | - | 3.A.6.1.1 |
| pfam | Rep_1352_c_121 | Rep_1352_c_121_4 | 3059 | 4360 | - | UPF0004 | TRAM | Radical_SAM |
| TC | Rep_1352_c_121 | Rep_1352_c_121_5 | 4544 | 6139 | - | 2.A.6.3.6 |
Gene ID: Rep_1352_c_121_2
Type: CAZyme
Location: 653 - 1768 (-)
Type: CAZyme
Location: 653 - 1768 (-)
Gene ID: Rep_1352_c_121_3
Type: TC
Location: 1795 - 3036 (-)
Type: TC
Location: 1795 - 3036 (-)
Gene ID: Rep_1352_c_121_4
Type: pfam
Location: 3059 - 4360 (-)
Type: pfam
Location: 3059 - 4360 (-)
Gene ID: Rep_1352_c_121_5
Type: TC
Location: 4544 - 6139 (-)
Type: TC
Location: 4544 - 6139 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium
Species
Fusobacterium simiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.