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Cluster: Rep_1351_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1351_c_44 Rep_1351_c_44_20 21394 22032 - 9.B.186.1.2
NULL(UNKNOWN) Rep_1351_c_44 Rep_1351_c_44_21 22200 22664 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_1351_c_44 Rep_1351_c_44_22 22830 23651 + CbiX | CbiK
CAZyme Rep_1351_c_44 Rep_1351_c_44_23 23912 25471 - GT83
CAZyme Rep_1351_c_44 Rep_1351_c_44_24 25543 26682 - GT83
pfam Rep_1351_c_44 Rep_1351_c_44_25 26666 28003 - UDPG_MGDP_dh | NAD_Gly3P_dh_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam Rep_1351_c_44 Rep_1351_c_44_26 28006 29043 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd | GDP_Man_Dehyd
CAZyme Rep_1351_c_44 Rep_1351_c_44_27 29046 30599 - GT83
pfam Rep_1351_c_44 Rep_1351_c_44_28 30818 31342 - PepSY | PepSY
TC Rep_1351_c_44 Rep_1351_c_44_29 31436 31690 - 2.A.123.4.1
CAZyme Rep_1351_c_44 Rep_1351_c_44_30 31692 32405 - GT2
Gene ID: Rep_1351_c_44_20
Type: TC
Location: 21394 - 22032 (-)
Gene ID: Rep_1351_c_44_21
Type:
Location: 22200 - 22664 (-)
Gene ID: Rep_1351_c_44_22
Type: pfam
Location: 22830 - 23651 (+)
Gene ID: Rep_1351_c_44_23
Type: CAZyme
Location: 23912 - 25471 (-)
Gene ID: Rep_1351_c_44_24
Type: CAZyme
Location: 25543 - 26682 (-)
Gene ID: Rep_1351_c_44_25
Type: pfam
Location: 26666 - 28003 (-)
Gene ID: Rep_1351_c_44_26
Type: pfam
Location: 28006 - 29043 (-)
Gene ID: Rep_1351_c_44_27
Type: CAZyme
Location: 29046 - 30599 (-)
Gene ID: Rep_1351_c_44_28
Type: pfam
Location: 30818 - 31342 (-)
Gene ID: Rep_1351_c_44_29
Type: TC
Location: 31436 - 31690 (-)
Gene ID: Rep_1351_c_44_30
Type: CAZyme
Location: 31692 - 32405 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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