Cluster: Rep_1351_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1351
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1351_c_30 | Rep_1351_c_30_14 | 14833 | 15909 | + | GT9 |
| TC | Rep_1351_c_30 | Rep_1351_c_30_15 | 15913 | 17364 | + | 2.A.38.1.1 |
| pfam | Rep_1351_c_30 | Rep_1351_c_30_16 | 17423 | 18121 | - | TMEM164 |
| pfam | Rep_1351_c_30 | Rep_1351_c_30_17 | 18133 | 18783 | - | Cauli_VI |
| TC | Rep_1351_c_30 | Rep_1351_c_30_18 | 19060 | 20562 | + | 3.A.1.5.27 |
Gene ID: Rep_1351_c_30_14
Type: CAZyme
Location: 14833 - 15909 (+)
Type: CAZyme
Location: 14833 - 15909 (+)
Gene ID: Rep_1351_c_30_15
Type: TC
Location: 15913 - 17364 (+)
Type: TC
Location: 15913 - 17364 (+)
Gene ID: Rep_1351_c_30_16
Type: pfam
Location: 17423 - 18121 (-)
Type: pfam
Location: 17423 - 18121 (-)
Gene ID: Rep_1351_c_30_17
Type: pfam
Location: 18133 - 18783 (-)
Type: pfam
Location: 18133 - 18783 (-)
Gene ID: Rep_1351_c_30_18
Type: TC
Location: 19060 - 20562 (+)
Type: TC
Location: 19060 - 20562 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium
Species
Fusobacterium animalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.