dbCAN Logo

Cluster: Rep_1351_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1351_c_23 Rep_1351_c_23_42 46565 47950 - GT5
pfam Rep_1351_c_23 Rep_1351_c_23_43 47967 49130 - NTP_transferase | Hexapep_GlmU
pfam Rep_1351_c_23 Rep_1351_c_23_44 49152 50300 - NTP_transferase | Hexapep_GlmU
CAZyme Rep_1351_c_23 Rep_1351_c_23_45 50330 52156 - CBM48 | GH13_9
CAZyme Rep_1351_c_23 Rep_1351_c_23_46 52184 54556 - GT35
CAZyme Rep_1351_c_23 Rep_1351_c_23_47 54546 56066 - GH77
NULL(UNKNOWN) Rep_1351_c_23 Rep_1351_c_23_48 56275 57057 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1351_c_23 Rep_1351_c_23_49 57077 57763 - 1.A.14.2.2
TC Rep_1351_c_23 Rep_1351_c_23_50 57789 60287 - 4.C.1.1.7
Gene ID: Rep_1351_c_23_42
Type: CAZyme
Location: 46565 - 47950 (-)
Gene ID: Rep_1351_c_23_43
Type: pfam
Location: 47967 - 49130 (-)
Gene ID: Rep_1351_c_23_44
Type: pfam
Location: 49152 - 50300 (-)
Gene ID: Rep_1351_c_23_45
Type: CAZyme
Location: 50330 - 52156 (-)
Gene ID: Rep_1351_c_23_46
Type: CAZyme
Location: 52184 - 54556 (-)
Gene ID: Rep_1351_c_23_47
Type: CAZyme
Location: 54546 - 56066 (-)
Gene ID: Rep_1351_c_23_48
Type:
Location: 56275 - 57057 (-)
Gene ID: Rep_1351_c_23_49
Type: TC
Location: 57077 - 57763 (-)
Gene ID: Rep_1351_c_23_50
Type: TC
Location: 57789 - 60287 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List