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Cluster: Rep_1351_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1351_c_48 Rep_1351_c_48_181 203648 205216 - 3.A.1.9.2
TC Rep_1351_c_48 Rep_1351_c_48_182 205185 205928 - 3.A.1.9.1
TC Rep_1351_c_48 Rep_1351_c_48_183 206209 207084 - 3.A.1.9.2
pfam Rep_1351_c_48 Rep_1351_c_48_184 207222 207677 - DUF386
CAZyme Rep_1351_c_48 Rep_1351_c_48_185 207805 208962 + CE9
TC Rep_1351_c_48 Rep_1351_c_48_186 208992 210218 - 3.A.1.122.2
TC Rep_1351_c_48 Rep_1351_c_48_187 210215 210877 - 3.A.1.122.14
Gene ID: Rep_1351_c_48_181
Type: TC
Location: 203648 - 205216 (-)
Gene ID: Rep_1351_c_48_182
Type: TC
Location: 205185 - 205928 (-)
Gene ID: Rep_1351_c_48_183
Type: TC
Location: 206209 - 207084 (-)
Gene ID: Rep_1351_c_48_184
Type: pfam
Location: 207222 - 207677 (-)
Gene ID: Rep_1351_c_48_185
Type: CAZyme
Location: 207805 - 208962 (+)
Gene ID: Rep_1351_c_48_186
Type: TC
Location: 208992 - 210218 (-)
Gene ID: Rep_1351_c_48_187
Type: TC
Location: 210215 - 210877 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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