Cluster: Rep_1350_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1350
- CGC Family ID: CGCFAM_08939
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1350_c_77 | Rep_1350_c_77_3 | 1067 | 3577 | + | 4.C.1.1.7 |
| TC | Rep_1350_c_77 | Rep_1350_c_77_4 | 3602 | 4297 | + | 1.A.14.2.2 |
| NULL(UNKNOWN) | Rep_1350_c_77 | Rep_1350_c_77_5 | 4316 | 5092 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1350_c_77 | Rep_1350_c_77_6 | 5105 | 5866 | + | DUF1963 |
| CAZyme | Rep_1350_c_77 | Rep_1350_c_77_7 | 6053 | 7549 | + | GH77 |
Gene ID: Rep_1350_c_77_3
Type: TC
Location: 1067 - 3577 (+)
Type: TC
Location: 1067 - 3577 (+)
Gene ID: Rep_1350_c_77_4
Type: TC
Location: 3602 - 4297 (+)
Type: TC
Location: 3602 - 4297 (+)
Gene ID: Rep_1350_c_77_5
Type:
Location: 4316 - 5092 (+)
Type:
Location: 4316 - 5092 (+)
Gene ID: Rep_1350_c_77_6
Type: pfam
Location: 5105 - 5866 (+)
Type: pfam
Location: 5105 - 5866 (+)
Gene ID: Rep_1350_c_77_7
Type: CAZyme
Location: 6053 - 7549 (+)
Type: CAZyme
Location: 6053 - 7549 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.