Cluster: Rep_1346_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1346
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1346_c_97 | Rep_1346_c_97_2 | 237 | 575 | + | 4.A.3.2.8 |
| TC | Rep_1346_c_97 | Rep_1346_c_97_3 | 727 | 2079 | + | 9.A.40.2.1 |
| TC | Rep_1346_c_97 | Rep_1346_c_97_4 | 2179 | 3561 | + | 2.A.40.7.6 |
| CAZyme | Rep_1346_c_97 | Rep_1346_c_97_5 | 3669 | 5714 | - | GT51 |
Gene ID: Rep_1346_c_97_2
Type: TC
Location: 237 - 575 (+)
Type: TC
Location: 237 - 575 (+)
Gene ID: Rep_1346_c_97_3
Type: TC
Location: 727 - 2079 (+)
Type: TC
Location: 727 - 2079 (+)
Gene ID: Rep_1346_c_97_4
Type: TC
Location: 2179 - 3561 (+)
Type: TC
Location: 2179 - 3561 (+)
Gene ID: Rep_1346_c_97_5
Type: CAZyme
Location: 3669 - 5714 (-)
Type: CAZyme
Location: 3669 - 5714 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Leptotrichiaceae
Genus
Leptotrichia
Species
Leptotrichia wadei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.