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Cluster: Rep_1346_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1346_c_62 Rep_1346_c_62_1 1 1158 - 2.A.25.1.3
pfam Rep_1346_c_62 Rep_1346_c_62_2 1661 2383 - Fic
CAZyme Rep_1346_c_62 Rep_1346_c_62_3 2411 3160 - GT2
pfam Rep_1346_c_62 Rep_1346_c_62_4 3185 4165 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
pfam Rep_1346_c_62 Rep_1346_c_62_5 4275 4544 - Acetyltransf_1 | Acetyltransf_CG
TC Rep_1346_c_62 Rep_1346_c_62_6 4615 5373 - 3.A.1.17.13
TC Rep_1346_c_62 Rep_1346_c_62_7 5511 6485 - 3.A.1.17.8
TC Rep_1346_c_62 Rep_1346_c_62_8 6579 7334 - 3.A.1.17.13
Gene ID: Rep_1346_c_62_1
Type: TC
Location: 1 - 1158 (-)
Gene ID: Rep_1346_c_62_2
Type: pfam
Location: 1661 - 2383 (-)
Gene ID: Rep_1346_c_62_3
Type: CAZyme
Location: 2411 - 3160 (-)
Gene ID: Rep_1346_c_62_4
Type: pfam
Location: 3185 - 4165 (-)
Gene ID: Rep_1346_c_62_5
Type: pfam
Location: 4275 - 4544 (-)
Gene ID: Rep_1346_c_62_6
Type: TC
Location: 4615 - 5373 (-)
Gene ID: Rep_1346_c_62_7
Type: TC
Location: 5511 - 6485 (-)
Gene ID: Rep_1346_c_62_8
Type: TC
Location: 6579 - 7334 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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