Cluster: Rep_1346_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1346
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1346_c_54 | Rep_1346_c_54_1 | 1 | 870 | - | 1.B.3.1.2 |
| pfam | Rep_1346_c_54 | Rep_1346_c_54_2 | 972 | 2483 | - | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| CAZyme | Rep_1346_c_54 | Rep_1346_c_54_3 | 3439 | 4479 | + | GT9 |
Gene ID: Rep_1346_c_54_1
Type: TC
Location: 1 - 870 (-)
Type: TC
Location: 1 - 870 (-)
Gene ID: Rep_1346_c_54_2
Type: pfam
Location: 972 - 2483 (-)
Type: pfam
Location: 972 - 2483 (-)
Gene ID: Rep_1346_c_54_3
Type: CAZyme
Location: 3439 - 4479 (+)
Type: CAZyme
Location: 3439 - 4479 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Leptotrichiaceae
Genus
Leptotrichia
Species
Leptotrichia wadei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.