Cluster: Rep_1346_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1346
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1346_c_13 | Rep_1346_c_13_11 | 10190 | 11245 | - | 1.A.23.4.1 |
| pfam | Rep_1346_c_13 | Rep_1346_c_13_12 | 11381 | 12922 | - | CMAS | Methyltransf_4 | Methyltransf_11 | Methyltransf_12 | MethyTransf_Reg | Methyltransf_25 | Methyltransf_31 |
| pfam | Rep_1346_c_13 | Rep_1346_c_13_13 | 12999 | 13835 | - | Methyltransf_4 |
| CAZyme | Rep_1346_c_13 | Rep_1346_c_13_14 | 13882 | 15141 | - | GT30 |
Gene ID: Rep_1346_c_13_11
Type: TC
Location: 10190 - 11245 (-)
Type: TC
Location: 10190 - 11245 (-)
Gene ID: Rep_1346_c_13_12
Type: pfam
Location: 11381 - 12922 (-)
Type: pfam
Location: 11381 - 12922 (-)
Gene ID: Rep_1346_c_13_13
Type: pfam
Location: 12999 - 13835 (-)
Type: pfam
Location: 12999 - 13835 (-)
Gene ID: Rep_1346_c_13_14
Type: CAZyme
Location: 13882 - 15141 (-)
Type: CAZyme
Location: 13882 - 15141 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Leptotrichiaceae
Genus
Leptotrichia
Species
Leptotrichia wadei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.