Cluster: Rep_1346_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1346
- CGC Family ID: CGCFAM_02968
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1346_c_152 | Rep_1346_c_152_1 | 3 | 959 | + | CE1 |
| pfam | Rep_1346_c_152 | Rep_1346_c_152_2 | 1267 | 2679 | + | Mur_ligase_C | Mur_ligase_M |
| TC | Rep_1346_c_152 | Rep_1346_c_152_3 | 2742 | 3830 | + | 9.B.146.1.3 |
Gene ID: Rep_1346_c_152_1
Type: CAZyme
Location: 3 - 959 (+)
Type: CAZyme
Location: 3 - 959 (+)
Gene ID: Rep_1346_c_152_2
Type: pfam
Location: 1267 - 2679 (+)
Type: pfam
Location: 1267 - 2679 (+)
Gene ID: Rep_1346_c_152_3
Type: TC
Location: 2742 - 3830 (+)
Type: TC
Location: 2742 - 3830 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Leptotrichiaceae
Genus
Leptotrichia
Species
Leptotrichia wadei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.